SiteMap References

1.

Nayal, M.; Honig, B. On the nature of cavities on protein surfaces: Application to the identification of drug-binding sites. Proteins 2006, 63, 892.

2.

Halgren, T. A. New Method for Fast and Accurate Binding-site Identification and Analysis, Chem. Biol. Drug Des., 2007, 69, 146.

3.

Friesner, R. A., Murphy, R. B., Repasky, M. P., Frye, L. L., Greenwood, J. R., Halgren, T. A., Sanschagrin, P. C., Mainz, D. T. Extra Precision Glide: Docking and Scoring Based on a New Theory of Molecular Recognition. J. Med. Chem. 2006, 49, 6177.

4.

Weber, A.; Halgren, T. A. et al. Design and Synthesis of P2-P1’-Linked Macrocyclic Human Renin Inhibitors. J. Med. Chem. 1991, 34, 2692.

5.

Goodford, P. J. A Computational Procedure for Determining Energetically Favorable Binding Sites on Biologically Important Macromolecules. J. Med. Chem. 1985, 28, 849.

6.

Wang, R.; Fang, X.; Lu, Y.; Yang, C.-Y.; Wang, S. The PDBbind Database: Methodologies and updates. J. Med. Chem. 2005, 48, 4111.

7.

Friesner, R. A.; Banks, J. L.; Murphy, R. B.; Halgren, T. A.; Klicic, J. J.; Mainz, D. T.; Repasky, M. P.; Knoll, E. H.; Shelley, M.; Perry, J. K.; Shaw, D. E.; Francis, P.; Shenkin, P. S. Glide: A New Approach for Rapid, Accurate Docking and Scoring. 1. Method and Assessment of Docking Accuracy. J. Med. Chem. 2004, 47, 1739.

8.

Halgren, T. A. Identifying and Characterizing Binding Sites and Assessing Druggability, J. Chem. Info. Model., 2009, 49, 377.

9.

Therien, M.; Skorey, K.; Zamboni, R.; Li, C. S.; Lau, C. K.; LeRiche, T.; Truong, V. L.; Waddleton, D,; Ramachandran, C. Synthesis of a novel peptidic photoaffinity probe for the PTP-1B enzyme. Bioorg. Med. Chem. Lett. 2004, 14, 2319.