cross_link_proteins_backend.py Command Help

Command: $SCHRODINGER/run cross_link_proteins_backend.py

usage: cross_link_proteins_backend.py [-h] [-infile INFILE]
                                      [-configfile CONFIGFILE]
                                      [-loopdb_path LOOPDB_PATH] [-host HOST]
                                      [-ncpus NCPUS]

This script is used by cross_link_proteins_gui.py.

options:
  -h, --help            show this help message and exit
  -infile INFILE        Input structure to build linkers into.
  -configfile CONFIGFILE
                        Config (yaml) file holding options and sequences to be
                        linked.
  -loopdb_path LOOPDB_PATH
                        Path for loop database used to build linkers.
  -host HOST            The host to run on.
  -ncpus NCPUS          Number of cpus on host.