mlff_builder_driver.py Command Help
Command: $SCHRODINGER/run mlff_builder_gui_dir/mlff_builder_driver.py
usage: $SCHRODINGER/run mlff_builder_gui_dir/mlff_builder_driver.py
[-h] -training_cycle_size TRAINING_CYCLE_SIZE -batch_size BATCH_SIZE
-training_cycles TRAINING_CYCLES [-gpu] [-use_dispersion_energy]
-forcefield
{MLFF:official:Hybrid_MPNICE,MLFF:official:Hybrid_MPNICE_I,MLFF:official:Hybrid_MPNICE_O,MLFF:official:Inorganic_MPNICE,MLFF:official:Organic_Crystals_MPNICE,MLFF:official:Organic_Crystals_MPNICE_v1.1,MLFF:official:Organic_MPNICE,MLFF:official:UMA_sm_oc20,MLFF:official:UMA_sm_odac,MLFF:official:UMA_sm_omat,MLFF:official:UMA_sm_omc,MLFF:official:UMA_sm_omol}
-codebase {qe,jaguar} [-seed SEED] [-weight_decay WEIGHT_DECAY]
[-learning_rate LEARNING_RATE]
input_file
MLFF builder driver. Copyright Schrodinger, LLC. All rights reserved.
positional arguments:
input_file File to read structures from for training.
options:
-h, -help Show this help message and exit.
-training_cycle_size TRAINING_CYCLE_SIZE
Train cycle size. (default: None)
-batch_size BATCH_SIZE
Training batch size. (default: None)
-training_cycles TRAINING_CYCLES
Maximum number of validation cycles. (default: None)
-gpu
-use_dispersion_energy
Whether to use Grimme dispersion energy. (default:
False)
-forcefield {MLFF:official:Hybrid_MPNICE,MLFF:official:Hybrid_MPNICE_I,MLFF:official:Hybrid_MPNICE_O,MLFF:official:Inorganic_MPNICE,MLFF:official:Organic_Crystals_MPNICE,MLFF:official:Organic_Crystals_MPNICE_v1.1,MLFF:official:Organic_MPNICE,MLFF:official:UMA_sm_oc20,MLFF:official:UMA_sm_odac,MLFF:official:UMA_sm_omat,MLFF:official:UMA_sm_omc,MLFF:official:UMA_sm_omol}
Force field to use in energy evaluations. (default:
None)
-codebase {qe,jaguar}
Codebase used to generate the reference data.
(default: None)
-seed SEED Seed for random number generator. (default: 1234)
-weight_decay WEIGHT_DECAY
Weight decay (if negative, decay towards initial
parameter values). (default: 0.0001)
-learning_rate LEARNING_RATE
Learning rate for optimizer. (default: 0.001)