shape_screen_gpu merge Command Help

Command: $SCHRODINGER/shape_screen_gpu merge

usage: $SCHRODINGER/shape_screen_gpu merge [-h]
                                           [-shape_data_treatment {copy,remote}]
                                           -target_file <target_file>
                                           [-infile <infile>]
                                           [-infile_list <infile_list>]
                                           [-source <string>] [-append]
                                           [-HOST <hostname>]
                                           [-JOBNAME JOBNAME]

Merge multiple Shape data files to a single file.

options:
  -h, --help            show this help message and exit

Shape Data File Treatment Options:
  -shape_data_treatment {copy,remote}
                        Whether to copy a locally accessible Shape data file
                        (.bin) to the job host or use a Shape data file that
                        already resides on the job host. The latter is
                        strongly recommended for large Shape data files to
                        avoid significant disk I/O and network traffic.

Required Arguments:
  -target_file <target_file>
                        Path of the merged Shape data file. If
                        -shape_data_treatment is set to remote, valid absolute
                        paths at the execution host must be provided.
  -infile <infile>      Path(s) of Shape data file(s) to be merged to the
                        target_file. Multiple Shape data files can be included
                        by specifying multiple -infile options, one per Shape
                        data file. If -shape_data_treatment is set to remote,
                        valid absolute paths at the execution host must be
                        provided.
  -infile_list <infile_list>
                        Name of the file that lists path(s) of Shape data
                        file(s) to be merged to the target_file (one per
                        line). If -shape_data_treatment is set to remote,
                        valid absolute paths at the execution host must be
                        provided.
  -source <string>      String to be set as the 'source' attribute in the
                        target_file. If unspecified, names of the input files
                        will be used. This option does not work for append
                        mode.
  -append               Append the infile(s) to the exsiting target_file
                        instead of merging to a new Shape data file. Merging
                        instead of appending is recommended to for better
                        compression

Job Control Options:
  -HOST <hostname>      Run job remotely on the indicated host entry.
  -JOBNAME JOBNAME      Provide an explicit name for the job.