trajectory_esp_analysis_driver.py Command Help

Command: $SCHRODINGER/run trajectory_esp_analysis_gui_dir/trajectory_esp_analysis_driver.py

usage: $SCHRODINGER/run trajectory_esp_analysis_gui_dir/trajectory_esp_analysis_driver.py
       [-h] -cms_file CMS_FILE -trj TRJ [-trj_min TRJ_MIN] [-trj_max TRJ_MAX]
       [-trj_step TRJ_STEP] [-partial] [-bin_width (A)] [-axis {X,Y,Z}]
       [-center_asl CENTER_ASL] [-mol_ids MOL_IDS]
       [-rel_permittivity REL_PERMITTIVITY] [-HOST <hostname>] [-D]
       [-JOBNAME JOBNAME]

Script to calculate charge density and electrostatic potential for a
trajectory Copyright Schrodinger, LLC. All rights reserved.

options:
  -h, -help             Show this help message and exit.
  -cms_file CMS_FILE    Input cms file (default: None)
  -trj TRJ              Directory of the trajectory (default: None)
  -trj_min TRJ_MIN      Minimum of trajectory frame to be analysed. (default:
                        None)
  -trj_max TRJ_MAX      Maximum of trajectory frame to be analysed. (default:
                        None)
  -trj_step TRJ_STEP    Use every n-th frame in the trajectory range. The
                        first and last frames in the range will always be
                        included. (default: None)
  -partial              Use partial charges instead of formal charges in the
                        calculation. (default: False)
  -bin_width (A)        The thickness of slices for binning and integration.
                        (default: 0.8)
  -axis {X,Y,Z}         The axis along which to calculate properties when the
                        interface is planar. Cannot be used with -mol_ids
                        flag. (default: None)
  -center_asl CENTER_ASL
                        Center the trajectory on this ASL for planar
                        interface. (default: None)
  -mol_ids MOL_IDS      Comma separated molecule numbers, one from each
                        molecular species that constitute the micelle. Cannot
                        be used with -axis or -center_asl flags. (default:
                        None)
  -rel_permittivity REL_PERMITTIVITY
                        Relative permittivity of the solvent. (default: 80)

Job Control Options:
  -HOST <hostname>      Run job remotely on the indicated host entry.
                        (default: localhost)
  -D, -DEBUG            Show details of Job Control operation. (default:
                        False)
  -JOBNAME JOBNAME      Provide an explicit name for the job. (default: None)